SwissParam - Topology and parameters for small organic molecules
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Directory of computer-aided Drug Design tools. These tools are classified according to their application field, trying to cover the whole drug design pipeline. If you think that an interesting tool is missing in this list, please contact us.
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Sequence sites, features and motifs. ExPASy is the SIB Bioinformatics Resource Portal. In different areas of life sciences including proteomics, genomics, phylogeny, systems biology, population genetics, transcriptomics etc. This service provides topology and parameters for small molecules, for use with CHARMM and GROMAC.
Confirm the exception on the next page, or. SwissSidechain is a structural and molecular mechanics database of hundreds of non-natural amino-acid sidechains that can be used to study in silico. Their insertion into natural peptides or proteins. This website is provided and maintained by the Molecular modeling group.
Confirm the exception on the next page, or. Please consider testing the beta version. A web service to predict the molecular interactions that may occur between a target protein and a small molecule. Would you like to organize a workshop? Please let us know.
Confirm the exception on the next page, or. Target prediction has been submitted. Calculations can take up to one minute.
Confirm the exception on the next page, or. This website allows you to perform ligand-based virtual screening of several libraries of small molecules. Choose a reference small molecule. Paste a SMILES in this box, or draw the reference molecule.
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We identified that swissparam.ch is implementing the Apache/2.2.22 (Ubuntu) operating system.SITE TITLE
SwissParam - Topology and parameters for small organic moleculesDESCRIPTION
Determine topology and parameters for small organic molecules, for use with CHARMM or GROMACSPARSED CONTENT
The domain states the following, "In order to avoid security-related warning messages when switching to secured connection, you may want either to." I analyzed that the web page said " Confirm the exception on the next page, or." They also stated " This service provides topology and parameters for small organic molecules compatible with the CHARMM all atoms force field, for use with CHARMM and GROMACS. Created and maintained by the Molecular modeling group. SwissParam is automatically used by SwissDock." The meta header had parameter as the first search term. This keyword was followed by topology, molecular modeling, and CHARMM which isn't as important as parameter. The other words they uses is GROMOS. GROMACS is also included and could not be seen by search engines.SEE OTHER WEB PAGES
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